Omophub Mcp
Let your coding agent search, map, and navigate OMOP standard medical vocabularies while you build health analytics, cohort tools, or FHIR-to-OMOP pipelines.
Overview
OMOPHub MCP is a MCP server for the Build phase that lets agents search, lookup, map, and navigate OMOP medical vocabularies via the OMOPHub API.
What is this MCP server?
- Search, lookup, map, and navigate OMOP medical vocabularies from the agent
- npm stdio package @omophub/omophub-mcp v1.1.0
- Requires OMOPHUB_API_KEY from omophub.com/dashboard/api-keys
- Speeds concept mapping for OHDSI-style analytics and ETL design
- Keeps vocabulary reasoning inside MCP tool calls instead of manual browser tabs
- Package version 1.1.0, npm identifier @omophub/omophub-mcp
- Transport: stdio
- 1 required secret env var: OMOPHUB_API_KEY
Community signal: 3 GitHub stars.
What problem does it solve?
Builders waste hours flipping between vocabulary browsers and code when standardizing clinical concepts for OMOP pipelines.
Who is it for?
Solo developers building OMOP-based analytics, research tooling, or terminology mapping with an MCP coding agent.
Skip if: General web apps with no clinical coding standards, or teams prohibited from sending terminology queries to a hosted API.
What do I get? / Deliverables
With OMOPHUB_API_KEY configured, your agent can query and map OMOP vocabularies in-thread while you implement integrations and analytics models.
- Agent-accessible OMOP vocabulary search and lookup tools
- Faster concept mapping decisions embedded in development workflows
- Stdio MCP registration for local coding agents
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Journey fit
OMOP vocabulary work is integration and data-model wiring during product build, especially for clinical or observational health products. The server connects agents to OMOPHub’s vocabulary APIs—core backend/data integration, not frontend or launch SEO.
How it compares
Domain-specific OMOP vocabulary MCP integration, not a generic database MCP or marketing skill.
Common Questions / FAQ
Who is OMOPHub MCP for?
Builders and data engineers shipping health or research products that use OMOP vocabularies and want agent-assisted search and mapping.
When should I use OMOPHub MCP?
Use it during build-phase integrations while designing ETL, cohort definitions, or analytics that require correct OMOP concept resolution.
How do I add OMOPHub MCP to my agent?
Get an API key at omophub.com/dashboard/api-keys, install @omophub/omophub-mcp, set OMOPHUB_API_KEY, and add the stdio server to your MCP client config.