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Pyvene Interventions

  • 431 installs
  • 11.2k repo stars
  • Updated June 16, 2026
  • orchestra-research/ai-research-skills

pyvene-interventions is a Claude Code skill that wraps Hugging Face causal language models with pyvene IntervenableModel configs so developers who study or steer model internals can run layer-level interventions and gene

About

pyvene-interventions is an Orchestra Research skill for the pyvene interpretability library on Hugging Face causal LMs. The skill documents IntervenableModel construction with IntervenableConfig and RepresentationConfig, targeting specific layers and components such as block_output with VanillaIntervention types. Developers reach for pyvene-interventions when agents or research scripts need controlled activation swaps between base and source inputs during forward passes. Examples load AutoModelForCausalLM checkpoints like gpt2 and return both original and intervened outputs from a single intervenable call, replacing manual hook registration.

  • Documents IntervenableModel wrapping AutoModelForCausalLM with RepresentationConfig for layer and component targets
  • Covers forward passes with base and source inputs, unit_locations for position-specific interventions, and output_origin
  • Includes intervenable.generate for max_new_tokens generation under intervention
  • Save/load local checkpoints and HuggingFace hub publish and load paths for intervention bundles

Pyvene Interventions by the numbers

  • 431 all-time installs (skills.sh)
  • +30 installs in the week ending Jul 26, 2026 (Skillselion tracking)
  • Ranked #474 of 2,066 Data Science & ML skills by installs in the Skillselion catalog
  • Security screen: MEDIUM risk (skills.sh audit)
  • Data as of Jul 28, 2026 (Skillselion catalog sync)
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Last updatedJune 16, 2026
Repositoryorchestra-research/ai-research-skills

How do you run layer interventions on Hugging Face LMs?

Wrap Hugging Face causal LMs with pyvene IntervenableModel configs so agents can run layer-level interventions and generation without bespoke forward hooks.

Who is it for?

ML researchers and agent engineers experimenting with causal LM activation interventions on Hugging Face transformers.

Skip if: Production inference teams who only need standard generation with no activation-level steering or interpretability work.

When should I use this skill?

A developer asks to intervene on transformer layer activations, configure pyvene IntervenableModel, or compare base versus source forward outputs.

What you get

IntervenableModel config, representation layer map, and paired original/intervened forward-pass outputs.

  • IntervenableModel config
  • intervention forward-pass script
  • base versus intervened output tensors

Files

SKILL.mdMarkdownGitHub ↗

pyvene: Causal Interventions for Neural Networks

pyvene is Stanford NLP's library for performing causal interventions on PyTorch models. It provides a declarative, dict-based framework for activation patching, causal tracing, and interchange intervention training - making intervention experiments reproducible and shareable.

GitHub: stanfordnlp/pyvene (840+ stars) Paper: pyvene: A Library for Understanding and Improving PyTorch Models via Interventions (NAACL 2024)

When to Use pyvene

Use pyvene when you need to:

  • Perform causal tracing (ROME-style localization)
  • Run activation patching experiments
  • Conduct interchange intervention training (IIT)
  • Test causal hypotheses about model components
  • Share/reproduce intervention experiments via HuggingFace
  • Work with any PyTorch architecture (not just transformers)

Consider alternatives when:

  • You need exploratory activation analysis → Use TransformerLens
  • You want to train/analyze SAEs → Use SAELens
  • You need remote execution on massive models → Use nnsight
  • You want lower-level control → Use nnsight

Installation

pip install pyvene

Standard import:

import pyvene as pv

Core Concepts

IntervenableModel

The main class that wraps any PyTorch model with intervention capabilities:

import pyvene as pv
from transformers import AutoModelForCausalLM, AutoTokenizer

# Load base model
model = AutoModelForCausalLM.from_pretrained("gpt2")
tokenizer = AutoTokenizer.from_pretrained("gpt2")

# Define intervention configuration
config = pv.IntervenableConfig(
    representations=[
        pv.RepresentationConfig(
            layer=8,
            component="block_output",
            intervention_type=pv.VanillaIntervention,
        )
    ]
)

# Create intervenable model
intervenable = pv.IntervenableModel(config, model)

Intervention Types

TypeDescriptionUse Case
VanillaInterventionSwap activations between runsActivation patching
AdditionInterventionAdd activations to base runSteering, ablation
SubtractionInterventionSubtract activationsAblation
ZeroInterventionZero out activationsComponent knockout
RotatedSpaceInterventionDAS trainable interventionCausal discovery
CollectInterventionCollect activationsProbing, analysis

Component Targets

# Available components to intervene on
components = [
    "block_input",      # Input to transformer block
    "block_output",     # Output of transformer block
    "mlp_input",        # Input to MLP
    "mlp_output",       # Output of MLP
    "mlp_activation",   # MLP hidden activations
    "attention_input",  # Input to attention
    "attention_output", # Output of attention
    "attention_value_output",  # Attention value vectors
    "query_output",     # Query vectors
    "key_output",       # Key vectors
    "value_output",     # Value vectors
    "head_attention_value_output",  # Per-head values
]

Workflow 1: Causal Tracing (ROME-style)

Locate where factual associations are stored by corrupting inputs and restoring activations.

Step-by-Step

import pyvene as pv
from transformers import AutoModelForCausalLM, AutoTokenizer
import torch

model = AutoModelForCausalLM.from_pretrained("gpt2-xl")
tokenizer = AutoTokenizer.from_pretrained("gpt2-xl")

# 1. Define clean and corrupted inputs
clean_prompt = "The Space Needle is in downtown"
corrupted_prompt = "The ##### ###### ## ## ########"  # Noise

clean_tokens = tokenizer(clean_prompt, return_tensors="pt")
corrupted_tokens = tokenizer(corrupted_prompt, return_tensors="pt")

# 2. Get clean activations (source)
with torch.no_grad():
    clean_outputs = model(**clean_tokens, output_hidden_states=True)
    clean_states = clean_outputs.hidden_states

# 3. Define restoration intervention
def run_causal_trace(layer, position):
    """Restore clean activation at specific layer and position."""
    config = pv.IntervenableConfig(
        representations=[
            pv.RepresentationConfig(
                layer=layer,
                component="block_output",
                intervention_type=pv.VanillaIntervention,
                unit="pos",
                max_number_of_units=1,
            )
        ]
    )

    intervenable = pv.IntervenableModel(config, model)

    # Run with intervention
    _, patched_outputs = intervenable(
        base=corrupted_tokens,
        sources=[clean_tokens],
        unit_locations={"sources->base": ([[[position]]], [[[position]]])},
        output_original_output=True,
    )

    # Return probability of correct token
    probs = torch.softmax(patched_outputs.logits[0, -1], dim=-1)
    seattle_token = tokenizer.encode(" Seattle")[0]
    return probs[seattle_token].item()

# 4. Sweep over layers and positions
n_layers = model.config.n_layer
seq_len = clean_tokens["input_ids"].shape[1]

results = torch.zeros(n_layers, seq_len)
for layer in range(n_layers):
    for pos in range(seq_len):
        results[layer, pos] = run_causal_trace(layer, pos)

# 5. Visualize (layer x position heatmap)
# High values indicate causal importance

Checklist

  • [ ] Prepare clean prompt with target factual association
  • [ ] Create corrupted version (noise or counterfactual)
  • [ ] Define intervention config for each (layer, position)
  • [ ] Run patching sweep
  • [ ] Identify causal hotspots in heatmap

Workflow 2: Activation Patching for Circuit Analysis

Test which components are necessary for a specific behavior.

Step-by-Step

import pyvene as pv
from transformers import AutoModelForCausalLM, AutoTokenizer
import torch

model = AutoModelForCausalLM.from_pretrained("gpt2")
tokenizer = AutoTokenizer.from_pretrained("gpt2")

# IOI task setup
clean_prompt = "When John and Mary went to the store, Mary gave a bottle to"
corrupted_prompt = "When John and Mary went to the store, John gave a bottle to"

clean_tokens = tokenizer(clean_prompt, return_tensors="pt")
corrupted_tokens = tokenizer(corrupted_prompt, return_tensors="pt")

john_token = tokenizer.encode(" John")[0]
mary_token = tokenizer.encode(" Mary")[0]

def logit_diff(logits):
    """IO - S logit difference."""
    return logits[0, -1, john_token] - logits[0, -1, mary_token]

# Patch attention output at each layer
def patch_attention(layer):
    config = pv.IntervenableConfig(
        representations=[
            pv.RepresentationConfig(
                layer=layer,
                component="attention_output",
                intervention_type=pv.VanillaIntervention,
            )
        ]
    )

    intervenable = pv.IntervenableModel(config, model)

    _, patched_outputs = intervenable(
        base=corrupted_tokens,
        sources=[clean_tokens],
    )

    return logit_diff(patched_outputs.logits).item()

# Find which layers matter
results = []
for layer in range(model.config.n_layer):
    diff = patch_attention(layer)
    results.append(diff)
    print(f"Layer {layer}: logit diff = {diff:.3f}")

Workflow 3: Interchange Intervention Training (IIT)

Train interventions to discover causal structure.

Step-by-Step

import pyvene as pv
from transformers import AutoModelForCausalLM
import torch

model = AutoModelForCausalLM.from_pretrained("gpt2")

# 1. Define trainable intervention
config = pv.IntervenableConfig(
    representations=[
        pv.RepresentationConfig(
            layer=6,
            component="block_output",
            intervention_type=pv.RotatedSpaceIntervention,  # Trainable
            low_rank_dimension=64,  # Learn 64-dim subspace
        )
    ]
)

intervenable = pv.IntervenableModel(config, model)

# 2. Set up training
optimizer = torch.optim.Adam(
    intervenable.get_trainable_parameters(),
    lr=1e-4
)

# 3. Training loop (simplified)
for base_input, source_input, target_output in dataloader:
    optimizer.zero_grad()

    _, outputs = intervenable(
        base=base_input,
        sources=[source_input],
    )

    loss = criterion(outputs.logits, target_output)
    loss.backward()
    optimizer.step()

# 4. Analyze learned intervention
# The rotation matrix reveals causal subspace
rotation = intervenable.interventions["layer.6.block_output"][0].rotate_layer

DAS (Distributed Alignment Search)

# Low-rank rotation finds interpretable subspaces
config = pv.IntervenableConfig(
    representations=[
        pv.RepresentationConfig(
            layer=8,
            component="block_output",
            intervention_type=pv.LowRankRotatedSpaceIntervention,
            low_rank_dimension=1,  # Find 1D causal direction
        )
    ]
)

Workflow 4: Model Steering (Honest LLaMA)

Steer model behavior during generation.

import pyvene as pv
from transformers import AutoModelForCausalLM, AutoTokenizer

model = AutoModelForCausalLM.from_pretrained("meta-llama/Llama-2-7b-hf")
tokenizer = AutoTokenizer.from_pretrained("meta-llama/Llama-2-7b-hf")

# Load pre-trained steering intervention
intervenable = pv.IntervenableModel.load(
    "zhengxuanzenwu/intervenable_honest_llama2_chat_7B",
    model=model,
)

# Generate with steering
prompt = "Is the earth flat?"
inputs = tokenizer(prompt, return_tensors="pt")

# Intervention applied during generation
outputs = intervenable.generate(
    inputs,
    max_new_tokens=100,
    do_sample=False,
)

print(tokenizer.decode(outputs[0]))

Saving and Sharing Interventions

# Save locally
intervenable.save("./my_intervention")

# Load from local
intervenable = pv.IntervenableModel.load(
    "./my_intervention",
    model=model,
)

# Share on HuggingFace
intervenable.save_intervention("username/my-intervention")

# Load from HuggingFace
intervenable = pv.IntervenableModel.load(
    "username/my-intervention",
    model=model,
)

Common Issues & Solutions

Issue: Wrong intervention location

# WRONG: Incorrect component name
config = pv.RepresentationConfig(
    component="mlp",  # Not valid!
)

# RIGHT: Use exact component name
config = pv.RepresentationConfig(
    component="mlp_output",  # Valid
)

Issue: Dimension mismatch

# Ensure source and base have compatible shapes
# For position-specific interventions:
config = pv.RepresentationConfig(
    unit="pos",
    max_number_of_units=1,  # Intervene on single position
)

# Specify locations explicitly
intervenable(
    base=base_tokens,
    sources=[source_tokens],
    unit_locations={"sources->base": ([[[5]]], [[[5]]])},  # Position 5
)

Issue: Memory with large models

# Use gradient checkpointing
model.gradient_checkpointing_enable()

# Or intervene on fewer components
config = pv.IntervenableConfig(
    representations=[
        pv.RepresentationConfig(
            layer=8,  # Single layer instead of all
            component="block_output",
        )
    ]
)

Issue: LoRA integration

# pyvene v0.1.8+ supports LoRAs as interventions
config = pv.RepresentationConfig(
    intervention_type=pv.LoRAIntervention,
    low_rank_dimension=16,
)

Key Classes Reference

ClassPurpose
IntervenableModelMain wrapper for interventions
IntervenableConfigConfiguration container
RepresentationConfigSingle intervention specification
VanillaInterventionActivation swapping
RotatedSpaceInterventionTrainable DAS intervention
CollectInterventionActivation collection

Supported Models

pyvene works with any PyTorch model. Tested on:

  • GPT-2 (all sizes)
  • LLaMA / LLaMA-2
  • Pythia
  • Mistral / Mixtral
  • OPT
  • BLIP (vision-language)
  • ESM (protein models)
  • Mamba (state space)

Reference Documentation

For detailed API documentation, tutorials, and advanced usage, see the references/ folder:

FileContents
references/README.mdOverview and quick start guide
references/api.mdComplete API reference for IntervenableModel, intervention types, configurations
references/tutorials.mdStep-by-step tutorials for causal tracing, activation patching, DAS

External Resources

Tutorials

Papers

Official Documentation

Comparison with Other Tools

FeaturepyveneTransformerLensnnsight
Declarative configYesNoNo
HuggingFace sharingYesNoNo
Trainable interventionsYesLimitedYes
Any PyTorch modelYesTransformers onlyYes
Remote executionNoNoYes (NDIF)

Related skills

How it compares

Choose pyvene-interventions when you need declarative layer interventions on Hugging Face causal LMs instead of hand-written hook boilerplate.

FAQ

What is IntervenableModel in pyvene?

pyvene-interventions uses IntervenableModel as the core wrapper around Hugging Face causal LMs. Developers pass IntervenableConfig with RepresentationConfig entries to specify layer, component, and intervention_type for controlled forward passes.

How do pyvene interventions differ from manual hooks?

pyvene-interventions configures declarative RepresentationConfig objects instead of registering bespoke PyTorch forward hooks. A single intervenable call returns both original_output and intervened_output for base and source inputs.

Is Pyvene Interventions safe to install?

skills.sh reports 2 of 3 security scanners passed. Review the Security Audits panel on this page before installing in production.

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