
Clinical Reports
Draft publication-ready clinical case reports with IMRAD-style sections, abstract structure, and keyword guidance aligned to journal expectations.
Overview
Clinical Reports is an agent skill for the Build phase that fills a journal-style clinical case report template section by section.
Install
npx skills add https://github.com/k-dense-ai/scientific-agent-skills --skill clinical-reportsWhat is this skill?
- Full case-report skeleton: title, authors, keywords, abstract subsections, introduction, patient information
- Abstract targets 150–250 words with Introduction through Lessons blocks
- Introduction prompts for epidemiology, novelty, literature gap, and learning objectives
- Keyword guidance favors 2–5 MeSH-style terms
- Example title pattern for atypical clinical presentations
- Abstract word count target 150–250 words
- 2–5 keywords recommended
- Abstract includes 6 labeled subsections in the template
Adoption & trust: 526 installs on skills.sh; 27.6k GitHub stars; 2/3 security scanners passed (skills.sh audits).
What problem does it solve?
You have clinical facts but no consistent case-report outline that satisfies abstract length, IMRAD flow, and keyword conventions.
Who is it for?
Clinicians and medical writers using coding agents to draft case studies from approved, de-identified chart summaries.
Skip if: General SaaS README work, API documentation, or any use without proper patient privacy and ethics review.
When should I use this skill?
Drafting or restructuring a clinical case report from de-identified notes into journal-style sections.
What do I get? / Deliverables
You get a structured case-report draft with labeled sections and word-count targets ready for clinician edit, de-identification review, and journal formatting.
- Sectioned case-report draft
- Structured abstract blocks
- Keyword and introduction scaffolding
Recommended Skills
Journey fit
Build is where authored artifacts are produced; this skill outputs a full case-report manuscript rather than validating a product idea. Docs subphase covers long-form structured writing templates the agent fills with clinical narrative.
How it compares
A fixed medical manuscript template, not a literature-search or statistical analysis skill.
Common Questions / FAQ
Who is clinical-reports for?
Healthcare authors and researchers who need agent help structuring case reports for submission-style documents.
When should I use clinical-reports?
During Build docs work once you have de-identified case data and want a full report outline filled before journal-specific styling.
Is clinical-reports safe to install?
Check the Security Audits panel on this Prism page; never paste identifiable patient data into agents without institutional policy compliance.
SKILL.md
READMESKILL.md - Clinical Reports
# Clinical Case Report Template ## Title [Insert descriptive title that includes "Case Report" or "Case Study" and indicates the clinical focus] Example: Unusual Presentation of Acute Appendicitis in an Elderly Patient: A Case Report ## Author Information [Author names, affiliations, ORCID IDs] **Corresponding Author:** [Name] [Email] [Institution] ## Keywords [2-5 keywords, preferably MeSH terms] Example: Appendicitis, Atypical presentation, Elderly, Diagnostic imaging ## Abstract ### Introduction [What is unique about this case? Why is it worth reporting? 1-2 sentences] ### Patient Concerns [Primary symptoms and chief complaint] ### Diagnosis [Final diagnosis, how it was reached] ### Interventions [Key treatments provided] ### Outcomes [Clinical outcome and follow-up status] ### Lessons [Main takeaway messages for clinicians] **Word count:** [150-250 words] ## Introduction [Background information - 2-4 paragraphs] **Paragraph 1:** Background on the condition - Epidemiology of the condition - Typical clinical presentation - Standard diagnostic approach - Current treatment guidelines **Paragraph 2:** Why this case is novel - What makes this case unusual or important - Gap in medical knowledge addressed - Literature review showing rarity or uniqueness - Clinical significance **Paragraph 3:** Objectives - Purpose of reporting this case - Learning points to be highlighted ## Patient Information **Demographics:** - Age: [e.g., "A 72-year-old" or "A woman in her 70s"] - Sex: [Male/Female] - Ethnicity: [if relevant to case] - Occupation: [if relevant] **Medical History:** - Past medical history: [chronic conditions] - Past surgical history: [prior surgeries] - Family history: [relevant family history] - Social history: [tobacco, alcohol, occupation, living situation] **Medications:** - Current medications: [list with doses] - Allergies: [drug allergies and reactions] **Presenting Symptoms:** - Chief complaint: ["Patient's words" or clinical presentation] - Duration of symptoms - Severity and characteristics - Associated symptoms - Relevant review of systems ## Clinical Findings **Physical Examination:** - Vital signs: [T, BP, HR, RR, SpO2] - General appearance: [overall state] - Systematic examination by organ system: - HEENT: [findings] - Cardiovascular: [findings] - Respiratory: [findings] - Abdomen: [findings] - Neurological: [findings] - Other relevant systems: [findings] **Pertinent Negatives:** [Important negative findings] ## Timeline | Date/Time | Event | |-----------|-------| | [Day -X or Date] | [Initial symptom onset] | | [Day 0 or Date] | [Presentation to healthcare] | | [Day 0 or Date] | [Initial evaluation and tests] | | [Day X or Date] | [Diagnosis confirmed] | | [Day X or Date] | [Treatment initiated] | | [Day X or Date] | [Hospital discharge or follow-up] | | [Month X or Date] | [Long-term follow-up] | *Note: Use relative days (Day 0, Day 1) or approximate dates (Month 1, Month 3) to protect patient privacy* ## Diagnostic Assessment ### Initial Diagnostic Workup **Laboratory Tests:** | Test | Result | Reference Range | Interpretation | |------|--------|----------------|----------------| | [Test name] | [Value with units] | [Normal range] | [High/Low/Normal] | **Imaging Studies:** - [Modality] ([Date]): [Key findings] - [Include images if applicable, with labels and arrows pointing to key findings] **Other Diagnostic Procedures:** - [Procedure name] ([Date]): [Findings] ### Differential Diagnosis **Diagnoses Considered:** 1. [Primary differential] - Supporting evidence: - Evidence against: 2. [Alternative diagnosis] - Supporting evidence: - Evidence against: 3. [Additional differentials as appropriate] ### Diagnostic Challenges [Describe any difficulties in reaching the diagnosis] - Atypical presentation - Misleading initial findings - Diagnostic delays - Complex decision-making ### Final Diagnosis **Confirmed Diagnosis:** [Final diagnosis with