Alphadynamics Skills
Talk to the alphadynamics pip package through Claude Code to predict peptide torsion-angle ensembles on the Ramachandran torus.
Overview
alphadynamics-skills is a plugin marketplace for the Build phase that connects Claude Code to AlphaDynamics peptide torsion-angle ensemble predictions.
What is this marketplace?
- Single alphadynamics plugin (v0.3.8, Apache-2.0)
- Natural-language interface to alphadynamics pip predictions
- Torsion-angle ensembles on (phi, psi) phase-oscillator / Ramachandran framing
- Keywords: protein-dynamics, ml-for-biology, ramachandran
- Maintainer: Krzysztof Gwozdz — homepage on GitHub AlphaDynamics repo
- Marketplace bundles 1 plugin: alphadynamics v0.3.8
- License Apache-2.0; keywords include protein-dynamics and ramachandran
Community signal: 8 GitHub stars.
What problem does it solve?
Peptide dynamics workflows stall when every phi/psi ensemble run requires manual Python scripts instead of an agent-callable scientific tool.
Who is it for?
Solo computational biology builders who want NL-driven access to AlphaDynamics on peptide sequences.
Skip if: Typical indie web/SaaS builders with no protein modeling or pip-based science stack.
What do I get? / Deliverables
After install, you can drive alphadynamics predictions from Claude via the alphadynamics plugin tied to the pip package.
- Agent-callable AlphaDynamics predictions for peptide inputs
- Installed alphadynamics plugin v0.3.8 from marketplace
- Repeatable NL bridge to ensemble outputs on the torus model
Plugins in this marketplace
1 plugin — install individually after you add the marketplace.
Recommended Marketplaces
Journey fit
Computational biology builders integrate a specialized ML model via a natural-language plugin during product Build, not during generic idea research. Integrations fits because the marketplace wraps an external scientific package (alphadynamics) behind an agent interface.
How it compares
Domain-specific scientific plugin marketplace, not a general DevOps or frontend skill pack.
Common Questions / FAQ
Who is Alphadynamics Skills for?
It is for developers and researchers modeling protein torsion dynamics who use Claude Code and the alphadynamics Python package.
When should I use Alphadynamics Skills?
Use it during Build when you are integrating ensemble predictions for peptide sequences into agent-assisted analysis pipelines.
How do I add Alphadynamics Skills to my agent?
Register the krisss0mecom/AlphaDynamics marketplace and enable the alphadynamics plugin from ./plugins/alphadynamics with alphadynamics installed in your Python environment.